IL_6FRK_031
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 6FRK|1|5|C|696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FRK_031 not in the Motif Atlas
- Geometric match to IL_1KUQ_002
- Geometric discrepancy: 0.3842
- The information below is about IL_1KUQ_002
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
6FRK|1|5|C|459
6FRK|1|5|C|460
*
6FRK|1|5|G|695
6FRK|1|5|C|696
6FRK|1|5|G|697
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 3
- Ribosomal protein eL28
- Chain E
- Ribosomal protein eL6
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