IL_6FRK_045

3D structure

PDB id

6FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAGG*CAGCAGCACUC

Length

16 nucleotides

Bulged bases

6FRK|1|5|G|933, 6FRK|1|5|A|935, 6FRK|1|5|C|936, 6FRK|1|5|U|937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FRK|1|5|G|731
6FRK|1|5|A|732
6FRK|1|5|A|733
6FRK|1|5|G|734
6FRK|1|5|G|735
*
6FRK|1|5|C|928
6FRK|1|5|A|929
6FRK|1|5|G|930
6FRK|1|5|C|931
6FRK|1|5|A|932
6FRK|1|5|G|933
6FRK|1|5|C|934
6FRK|1|5|A|935
6FRK|1|5|C|936
6FRK|1|5|U|937
6FRK|1|5|C|938

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

Ribosomal protein uL4

Chain M

Ribosomal protein eL14

Chain S

Ribosomal protein eL20