IL_6FRK_054
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUCC*GGCCCG
- Length
- 10 nucleotides
- Bulged bases
- 6FRK|1|5|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FRK_054 not in the Motif Atlas
- Geometric match to IL_7KJT_003
- Geometric discrepancy: 0.3981
- The information below is about IL_7KJT_003
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 56
Unit IDs
6FRK|1|5|C|1082
6FRK|1|5|U|1083
6FRK|1|5|C|1084
6FRK|1|5|C|1085
*
6FRK|1|5|G|1212
6FRK|1|5|G|1213
6FRK|1|5|C|1214
6FRK|1|5|C|1215
6FRK|1|5|C|1216
6FRK|1|5|G|1217
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain F
- Ribosomal protein uL30
Coloring options: