IL_6FRK_058

3D structure

PDB id

6FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

6FRK|1|5|G|1377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FRK|1|5|C|1357
6FRK|1|5|G|1358
6FRK|1|5|G|1359
6FRK|1|5|G|1360
6FRK|1|5|G|1361
*
6FRK|1|5|C|1376
6FRK|1|5|G|1377
6FRK|1|5|C|1378
6FRK|1|5|C|1379
6FRK|1|5|G|1380
6FRK|1|5|U|1381
6FRK|1|5|G|1382

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

Ribosomal protein uL4

Chain L

Ribosomal protein eL13

Chain N

Ribosomal protein L15

Chain a

Ribosomal protein uL15