IL_6FRK_091
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAGUG*CUC
- Length
- 8 nucleotides
- Bulged bases
- 6FRK|1|5|A|2002
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FRK_091 not in the Motif Atlas
- Homologous match to IL_8C3A_059
- Geometric discrepancy: 0.205
- The information below is about IL_8C3A_059
- Detailed Annotation
- Major groove platform with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_63959.1
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
6FRK|1|5|G|2001
6FRK|1|5|A|2002
6FRK|1|5|G|2003
6FRK|1|5|U|2004
6FRK|1|5|G|2005
*
6FRK|1|5|C|2014
6FRK|1|5|U|2015
6FRK|1|5|C|2016
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 4
- Ribosomal protein L12
Coloring options: