IL_6FRK_157
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAUUAU*AGAAUC
- Length
- 12 nucleotides
- Bulged bases
- 6FRK|1|5|A|4708
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FRK_157 not in the Motif Atlas
- Geometric match to IL_7RQB_107
- Geometric discrepancy: 0.2516
- The information below is about IL_7RQB_107
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.5
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6FRK|1|5|G|4680
6FRK|1|5|A|4681
6FRK|1|5|U|4682
6FRK|1|5|U|4683
6FRK|1|5|A|4684
6FRK|1|5|U|4685
*
6FRK|1|5|A|4705
6FRK|1|5|G|4706
6FRK|1|5|A|4707
6FRK|1|5|A|4708
6FRK|1|5|U|4709
6FRK|1|5|C|4710
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain H
- Ribosomal protein uL6
- Chain O
- Ribosomal protein uL13
- Chain m
- Ribosomal protein eL40
Coloring options: