IL_6FRK_165
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CG*UCG
- Length
- 5 nucleotides
- Bulged bases
- 6FRK|1|5|C|5054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FRK_165 not in the Motif Atlas
- Homologous match to IL_8C3A_137
- Geometric discrepancy: 0.5662
- The information below is about IL_8C3A_137
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
6FRK|1|5|C|4996
6FRK|1|5|G|4997
*
6FRK|1|5|U|5053
6FRK|1|5|C|5054
6FRK|1|5|G|5055
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain d
- Ribosomal protein eL31
- Chain r
- Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72
- Chain x
- Signal recognition particle 54 kDa protein
Coloring options: