IL_6FRK_178
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUGCCGAUCGGGUGUC*GAUCGCGCCUGUGAAU
- Length
- 32 nucleotides
- Bulged bases
- 6FRK|1|1|C|100, 6FRK|1|1|G|101, 6FRK|1|1|C|242, 6FRK|1|1|A|252
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FRK|1|1|A|96
6FRK|1|1|U|97
6FRK|1|1|G|98
6FRK|1|1|C|99
6FRK|1|1|C|100
6FRK|1|1|G|101
6FRK|1|1|A|102
6FRK|1|1|U|103
6FRK|1|1|C|104
6FRK|1|1|G|105
6FRK|1|1|G|106
6FRK|1|1|G|107
6FRK|1|1|U|108
6FRK|1|1|G|109
6FRK|1|1|U|110
6FRK|1|1|C|111
*
6FRK|1|1|G|239
6FRK|1|1|A|240
6FRK|1|1|U|241
6FRK|1|1|C|242
6FRK|1|1|G|243
6FRK|1|1|C|244
6FRK|1|1|G|245
6FRK|1|1|C|246
6FRK|1|1|C|247
6FRK|1|1|U|248
6FRK|1|1|G|249
6FRK|1|1|U|250
6FRK|1|1|G|251
6FRK|1|1|A|252
6FRK|1|1|A|253
6FRK|1|1|U|254
Current chains
- Chain 1
- Canis lupus familiaris RNA, 7SL, cytoplasmic 1 (RN7SL1), SRP RNA
Nearby chains
- Chain r
- Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72
- Chain u
- Signal recognition particle subunit SRP68
- Chain y
- SRP receptor alpha subunit
Coloring options: