IL_6FRK_186
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGGGGCGGCGCGCGCGCG*CCCCCGGAGCCCCGCGGACGCUACG
- Length
- 67 nucleotides
- Bulged bases
- 6FRK|1|5|A|2093, 6FRK|1|5|G|2094, 6FRK|1|5|G|2111, 6FRK|1|5|G|2114, 6FRK|1|5|G|2115, 6FRK|1|5|C|2116, 6FRK|1|5|C|2119, 6FRK|1|5|G|2122, 6FRK|1|5|C|2123, 6FRK|1|5|G|2124, 6FRK|1|5|G|2254, 6FRK|1|5|C|2255, 6FRK|1|5|C|2256, 6FRK|1|5|G|2259, 6FRK|1|5|C|2266, 6FRK|1|5|U|2267, 6FRK|1|5|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FRK|1|5|C|2087
6FRK|1|5|A|2088
6FRK|1|5|G|2089
6FRK|1|5|U|2090
6FRK|1|5|C|2091
6FRK|1|5|G|2092
6FRK|1|5|A|2093
6FRK|1|5|G|2094
6FRK|1|5|A|2095
6FRK|1|5|G|2096
6FRK|1|5|U|2097
6FRK|1|5|G|2098
6FRK|1|5|G|2099
6FRK|1|5|A|2100
6FRK|1|5|C|2101
6FRK|1|5|G|2102
6FRK|1|5|G|2103
6FRK|1|5|G|2104
6FRK|1|5|A|2105
6FRK|1|5|G|2106
6FRK|1|5|C|2107
6FRK|1|5|G|2108
6FRK|1|5|G|2109
6FRK|1|5|C|2110
6FRK|1|5|G|2111
6FRK|1|5|G|2112
6FRK|1|5|G|2113
6FRK|1|5|G|2114
6FRK|1|5|G|2115
6FRK|1|5|C|2116
6FRK|1|5|G|2117
6FRK|1|5|G|2118
6FRK|1|5|C|2119
6FRK|1|5|G|2120
6FRK|1|5|C|2121
6FRK|1|5|G|2122
6FRK|1|5|C|2123
6FRK|1|5|G|2124
6FRK|1|5|C|2125
6FRK|1|5|G|2126
6FRK|1|5|C|2127
6FRK|1|5|G|2128
*
6FRK|1|5|C|2246
6FRK|1|5|C|2247
6FRK|1|5|C|2248
6FRK|1|5|C|2249
6FRK|1|5|C|2250
6FRK|1|5|G|2251
6FRK|1|5|G|2252
6FRK|1|5|A|2253
6FRK|1|5|G|2254
6FRK|1|5|C|2255
6FRK|1|5|C|2256
6FRK|1|5|C|2257
6FRK|1|5|C|2258
6FRK|1|5|G|2259
6FRK|1|5|C|2260
6FRK|1|5|G|2261
6FRK|1|5|G|2262
6FRK|1|5|A|2263
6FRK|1|5|C|2264
6FRK|1|5|G|2265
6FRK|1|5|C|2266
6FRK|1|5|U|2267
6FRK|1|5|A|2268
6FRK|1|5|C|2269
6FRK|1|5|G|2270
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 3
- Ribosomal protein eL28
- Chain C
- Ribosomal protein uL4
- Chain E
- Ribosomal protein eL6
- Chain F
- Ribosomal protein uL30
- Chain Q
- Ribosomal protein eL18
- Chain e
- Ribosomal protein eL32
Coloring options: