IL_6FT6_033
3D structure
- PDB id
- 6FT6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6FT6|1|1|G|908, 6FT6|1|1|A|920, 6FT6|1|1|A|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FT6_033 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.1252
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6FT6|1|1|G|907
6FT6|1|1|G|908
6FT6|1|1|G|909
*
6FT6|1|1|U|919
6FT6|1|1|A|920
6FT6|1|1|A|921
6FT6|1|1|U|922
6FT6|1|1|C|923
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain N
- 60S ribosomal protein L15-A
- Chain P
- 60S ribosomal protein L17-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain j
- 60S ribosomal protein L37-A
Coloring options: