IL_6FTG_035

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

GAAGG*CAGCAGCACUC

Length

16 nucleotides

Bulged bases

6FTG|1|u|G|933, 6FTG|1|u|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTG|1|u|G|731
6FTG|1|u|A|732
6FTG|1|u|A|733
6FTG|1|u|G|734
6FTG|1|u|G|735
*
6FTG|1|u|C|928
6FTG|1|u|A|929
6FTG|1|u|G|930
6FTG|1|u|C|931
6FTG|1|u|A|932
6FTG|1|u|G|933
6FTG|1|u|C|934
6FTG|1|u|A|935
6FTG|1|u|C|936
6FTG|1|u|U|937
6FTG|1|u|C|938

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain C

Ribosomal protein L4

Chain M

Ribosomal protein L14

Chain S

eL20