IL_6FTG_067
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- AGA*UAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTG_067 not in the Motif Atlas
- Geometric match to IL_5TBW_042
- Geometric discrepancy: 0.0987
- The information below is about IL_5TBW_042
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6FTG|1|u|A|1749
6FTG|1|u|G|1750
6FTG|1|u|A|1751
*
6FTG|1|u|U|1779
6FTG|1|u|A|1780
6FTG|1|u|U|1781
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
- Chain I
- Ribosomal protein L10 (Predicted)
- Chain v
- 5S ribosomal RNA; 5S rRNA
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