IL_6FTG_068
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- GUCU*AAC
- Length
- 7 nucleotides
- Bulged bases
- 6FTG|1|u|U|1754, 6FTG|1|u|C|1755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTG_068 not in the Motif Atlas
- Geometric match to IL_7A0S_044
- Geometric discrepancy: 0.2947
- The information below is about IL_7A0S_044
- Detailed Annotation
- Intercalated cWW
- Broad Annotation
- Intercalated cWW
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
6FTG|1|u|G|1753
6FTG|1|u|U|1754
6FTG|1|u|C|1755
6FTG|1|u|U|1756
*
6FTG|1|u|A|1775
6FTG|1|u|A|1776
6FTG|1|u|C|1777
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
Coloring options: