IL_6FTG_074
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- CGCCCGAU*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTG_074 not in the Motif Atlas
- Geometric match to IL_7RQB_037
- Geometric discrepancy: 0.1127
- The information below is about IL_7RQB_037
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_15861.7
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 12
Unit IDs
6FTG|1|u|C|1911
6FTG|1|u|G|1912
6FTG|1|u|C|1913
6FTG|1|u|C|1914
6FTG|1|u|C|1915
6FTG|1|u|G|1916
6FTG|1|u|A|1917
6FTG|1|u|U|1918
*
6FTG|1|u|G|2064
6FTG|1|u|G|2065
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain F
- uL30
- Chain O
- uL13
- Chain S
- eL20
- Chain f
- eL33
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