IL_6FTG_079
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 6FTG|1|u|U|1947
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTG_079 not in the Motif Atlas
- Homologous match to IL_5TBW_053
- Geometric discrepancy: 0.3527
- The information below is about IL_5TBW_053
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
6FTG|1|u|G|1946
6FTG|1|u|U|1947
6FTG|1|u|G|1948
*
6FTG|1|u|C|2035
6FTG|1|u|C|2036
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain H
- uL6
- Chain S
- eL20
- Chain m
- eL40
- Chain v
- 5S ribosomal RNA; 5S rRNA
Coloring options: