IL_6FTG_081
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- GUGGC*GAAUC
- Length
- 10 nucleotides
- Bulged bases
- 6FTG|1|u|G|1975
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTG_081 not in the Motif Atlas
- Homologous match to IL_8C3A_058
- Geometric discrepancy: 0.4822
- The information below is about IL_8C3A_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30542.5
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6FTG|1|u|G|1973
6FTG|1|u|U|1974
6FTG|1|u|G|1975
6FTG|1|u|G|1976
6FTG|1|u|C|1977
*
6FTG|1|u|G|1989
6FTG|1|u|A|1990
6FTG|1|u|A|1991
6FTG|1|u|U|1992
6FTG|1|u|C|1993
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain I
- Ribosomal protein L10 (Predicted)
- Chain s
- 60S acidic ribosomal protein P0
- Chain t
- Ribosomal protein L12
Coloring options: