IL_6FTG_085
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- GAG*CC
- Length
- 5 nucleotides
- Bulged bases
- 6FTG|1|u|A|2300
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTG_085 not in the Motif Atlas
- Homologous match to IL_8C3A_062
- Geometric discrepancy: 0.4801
- The information below is about IL_8C3A_062
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
6FTG|1|u|G|2299
6FTG|1|u|A|2300
6FTG|1|u|G|2301
*
6FTG|1|u|C|2334
6FTG|1|u|C|2335
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain e
- eL32
- Chain r
- eL28
- Chain w
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: