IL_6FTG_158

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

GAAACG*CUCGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTG|1|u|G|4891
6FTG|1|u|A|4892
6FTG|1|u|A|4893
6FTG|1|u|A|4894
6FTG|1|u|C|4895
6FTG|1|u|G|4896
*
6FTG|1|u|C|4924
6FTG|1|u|U|4925
6FTG|1|u|C|4926
6FTG|1|u|G|4927
6FTG|1|u|C|4928

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain M

Ribosomal protein L14

Chain O

uL13