IL_6FTG_177

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

GGAUUCAACC*GGCGCAUUUCC

Length

21 nucleotides

Bulged bases

6FTG|1|u|A|686

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTG|1|u|G|464
6FTG|1|u|G|465
6FTG|1|u|A|466
6FTG|1|u|U|467
6FTG|1|u|U|468
6FTG|1|u|C|469
6FTG|1|u|A|470
6FTG|1|u|A|471
6FTG|1|u|C|472
6FTG|1|u|C|473
*
6FTG|1|u|G|681
6FTG|1|u|G|682
6FTG|1|u|C|683
6FTG|1|u|G|684
6FTG|1|u|C|685
6FTG|1|u|A|686
6FTG|1|u|U|687
6FTG|1|u|U|688
6FTG|1|u|U|689
6FTG|1|u|C|690
6FTG|1|u|C|691

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain 1

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1,RPN1

Chain E

60S ribosomal protein L6

Chain r

eL28