3D structure

PDB id
6FTG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
Experimental method
ELECTRON MICROSCOPY
Resolution
9.1 Å

Loop

Sequence
CGCGGAGC*GAACCUG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6FTG|1|u|C|4739
6FTG|1|u|G|4740
6FTG|1|u|C|4741
6FTG|1|u|G|4742
6FTG|1|u|G|4743
6FTG|1|u|A|4744
6FTG|1|u|G|4745
6FTG|1|u|C|4746
*
6FTG|1|u|G|4954
6FTG|1|u|A|4955
6FTG|1|u|A|4956
6FTG|1|u|C|4957
6FTG|1|u|C|4958
6FTG|1|u|U|4959
6FTG|1|u|G|4960

Current chains

Chain u
28S ribosomal RNA

Nearby chains

Chain f
eL33

Coloring options:

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