IL_6FTJ_049
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGAUC*GCGCAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTJ_049 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.3243
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_67427.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6FTJ|1|u|G|1425
6FTJ|1|u|G|1426
6FTJ|1|u|A|1427
6FTJ|1|u|U|1428
6FTJ|1|u|C|1429
*
6FTJ|1|u|G|1455
6FTJ|1|u|C|1456
6FTJ|1|u|G|1457
6FTJ|1|u|C|1458
6FTJ|1|u|A|1459
6FTJ|1|u|C|1460
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain Q
- uL14
- Chain b
- 60S ribosomal protein L29
Coloring options: