IL_6FTJ_189
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUU*AUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTJ_189 not in the Motif Atlas
- Homologous match to IL_8P9A_262
- Geometric discrepancy: 0.2513
- The information below is about IL_8P9A_262
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
6FTJ|1|u|U|1671
6FTJ|1|u|U|1672
6FTJ|1|u|U|1673
*
6FTJ|1|u|A|1682
6FTJ|1|u|U|1683
6FTJ|1|u|A|1684
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain L
- eL13
- Chain Q
- uL14
- Chain T
- eL21
- Chain a
- uL15
- Chain b
- 60S ribosomal protein L29
Coloring options: