IL_6FXC_081
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FXC_081 not in the Motif Atlas
- Homologous match to IL_5J7L_333
- Geometric discrepancy: 0.1084
- The information below is about IL_5J7L_333
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
6FXC|1|AA|C|2377
6FXC|1|AA|G|2378
6FXC|1|AA|A|2379
6FXC|1|AA|G|2380
*
6FXC|1|AA|C|2391
6FXC|1|AA|G|2392
6FXC|1|AA|A|2393
6FXC|1|AA|G|2394
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain A3
- 50S ribosomal protein L35
- Chain AU
- 50S ribosomal protein L27
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