IL_6FXC_221
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- CUAAGC*GUGAUGG
- Length
- 13 nucleotides
- Bulged bases
- 6FXC|1|BA|G|1569
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FXC_221 not in the Motif Atlas
- Geometric match to IL_4WF9_058
- Geometric discrepancy: 0.1565
- The information below is about IL_4WF9_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_88190.1
- Basepair signature
- cWW-L-R-tHS-L-R-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
6FXC|1|BA|C|1511
6FXC|1|BA|U|1512
6FXC|1|BA|A|1513
6FXC|1|BA|A|1514
6FXC|1|BA|G|1515
6FXC|1|BA|C|1516
*
6FXC|1|BA|G|1564
6FXC|1|BA|U|1565
6FXC|1|BA|G|1566
6FXC|1|BA|A|1567
6FXC|1|BA|U|1568
6FXC|1|BA|G|1569
6FXC|1|BA|G|1570
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: