IL_6FXC_291

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

UGAUGAAGGUC*GAUCGUAAAA

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FXC|1|Ba|U|417
6FXC|1|Ba|G|418
6FXC|1|Ba|A|419
6FXC|1|Ba|U|420
6FXC|1|Ba|G|421
6FXC|1|Ba|A|422
6FXC|1|Ba|A|423
6FXC|1|Ba|G|424
6FXC|1|Ba|G|425
6FXC|1|Ba|U|426
6FXC|1|Ba|C|427
*
6FXC|1|Ba|G|432
6FXC|1|Ba|A|433
6FXC|1|Ba|U|434
6FXC|1|Ba|C|435
6FXC|1|Ba|G|436
6FXC|1|Ba|U|437
6FXC|1|Ba|A|438
6FXC|1|Ba|A|439
6FXC|1|Ba|A|440
6FXC|1|Ba|A|441

Current chains

Chain Ba

16S ribosomal RNA

Nearby chains

Chain Bd

30S ribosomal protein S4