IL_6FXC_300

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

GUGAAAGCC*GAGGGUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FXC|1|Ba|G|612
6FXC|1|Ba|U|613
6FXC|1|Ba|G|614
6FXC|1|Ba|A|615
6FXC|1|Ba|A|616
6FXC|1|Ba|A|617
6FXC|1|Ba|G|618
6FXC|1|Ba|C|619
6FXC|1|Ba|C|620
*
6FXC|1|Ba|G|636
6FXC|1|Ba|A|637
6FXC|1|Ba|G|638
6FXC|1|Ba|G|639
6FXC|1|Ba|G|640
6FXC|1|Ba|U|641
6FXC|1|Ba|C|642

Current chains

Chain Ba

16S ribosomal RNA

Nearby chains

Chain Bd

30S ribosomal protein S4

Chain Bh

30S ribosomal protein S8

Chain Bp

30S ribosomal protein S16

Chain Bq

30S ribosomal protein S17