IL_6FXC_312

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6FXC_312 not in the Motif Atlas

Homologous match to IL_6CZR_150

Geometric discrepancy: 0.275

The information below is about IL_6CZR_150

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FXC|1|Ba|G|962
6FXC|1|Ba|G|963
*
6FXC|1|Ba|C|1236
6FXC|1|Ba|A|1237
6FXC|1|Ba|C|1238

Current chains

Chain Ba

16S ribosomal RNA

Nearby chains

Chain Bm

30S ribosomal protein S13

Chain Bs

30S ribosomal protein S19

Chain Bv

Ribosome hibernation promotion factor