Loop IL_6FXC

3D structure

PDB id: 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
Description: The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.76 Å

Loop

Sequence: CCCAGACAACUAGGAU*AUUUAAAGAGUGCGUAAUAGCUCACUAGUCGAG
Length: 49 nucleotides
Bulged bases: 6FXC|1|AA|A|1090, 6FXC|1|AA|G|1099, 6FXC|1|AA|A|1132, 6FXC|1|AA|U|1138
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6FXC|1|AA|C|1087
6FXC|1|AA|C|1088
6FXC|1|AA|C|1089
6FXC|1|AA|A|1090
6FXC|1|AA|G|1091
6FXC|1|AA|A|1092
6FXC|1|AA|C|1093
6FXC|1|AA|A|1094
6FXC|1|AA|A|1095
6FXC|1|AA|C|1096
6FXC|1|AA|U|1097
6FXC|1|AA|A|1098
6FXC|1|AA|G|1099
6FXC|1|AA|G|1100
6FXC|1|AA|A|1101
6FXC|1|AA|U|1102
*
6FXC|1|AA|A|1124
6FXC|1|AA|U|1125
6FXC|1|AA|U|1126
6FXC|1|AA|U|1127
6FXC|1|AA|A|1128
6FXC|1|AA|A|1129
6FXC|1|AA|A|1130
6FXC|1|AA|G|1131
6FXC|1|AA|A|1132
6FXC|1|AA|G|1133
6FXC|1|AA|U|1134
6FXC|1|AA|G|1135
6FXC|1|AA|C|1136
6FXC|1|AA|G|1137
6FXC|1|AA|U|1138
6FXC|1|AA|A|1139
6FXC|1|AA|A|1140
6FXC|1|AA|U|1141
6FXC|1|AA|A|1142
6FXC|1|AA|G|1143
6FXC|1|AA|C|1144
6FXC|1|AA|U|1145
6FXC|1|AA|C|1146
6FXC|1|AA|A|1147
6FXC|1|AA|C|1148
6FXC|1|AA|U|1149
6FXC|1|AA|A|1150
6FXC|1|AA|G|1151
6FXC|1|AA|U|1152
6FXC|1|AA|C|1153
6FXC|1|AA|G|1154
6FXC|1|AA|A|1155
6FXC|1|AA|G|1156

Current chains

Chain AA: 23S ribosomal RNA

Nearby chains

Chain A4: 50S ribosomal protein L36
Chain AG: 50S ribosomal protein L6

IL_6FXC_367