IL_6FYY_075
3D structure
- PDB id
- 6FYY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- UUG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FYY_075 not in the Motif Atlas
- Geometric match to IL_4WF9_018
- Geometric discrepancy: 0.1814
- The information below is about IL_4WF9_018
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
6FYY|1|2|U|1494
6FYY|1|2|U|1495
6FYY|1|2|G|1496
*
6FYY|1|2|C|1507
6FYY|1|2|U|1508
6FYY|1|2|G|1509
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain T
- KLLA0A07194p
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