IL_6GAW_037
3D structure
- PDB id
- 6GAW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GAW_037 not in the Motif Atlas
- Geometric match to IL_4V88_464
- Geometric discrepancy: 0.0952
- The information below is about IL_4V88_464
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6GAW|1|AA|G|845
6GAW|1|AA|C|846
6GAW|1|AA|C|847
6GAW|1|AA|C|848
*
6GAW|1|AA|G|923
6GAW|1|AA|U|924
6GAW|1|AA|A|925
6GAW|1|AA|A|926
6GAW|1|AA|C|927
Current chains
- Chain AA
- 12S ribosomal RNA, mitochondrial
Nearby chains
- Chain AV
- P-site fMet-tRNAMet, mitochondrial
- Chain AX
- MT-CO3 mRNA, mitochondrial
- Chain An
- Aurora kinase A interacting protein 1
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: