IL_6GAW_068
3D structure
- PDB id
- 6GAW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAACU*AUAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GAW_068 not in the Motif Atlas
- Homologous match to IL_7RQB_051
- Geometric discrepancy: 0.4823
- The information below is about IL_7RQB_051
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
6GAW|1|BA|G|682
6GAW|1|BA|U|683
6GAW|1|BA|A|684
6GAW|1|BA|A|685
6GAW|1|BA|C|686
6GAW|1|BA|U|687
*
6GAW|1|BA|A|694
6GAW|1|BA|U|695
6GAW|1|BA|A|696
6GAW|1|BA|C|697
Current chains
- Chain BA
- 16S ribosomal RNA, mitochondrial
Nearby chains
- Chain BW
- uL22m
- Chain BX
- uL23m
- Chain Bi
- mL45
- Chain Bw
- mL65
Coloring options: