IL_6GB2_003

3D structure

PDB id

6GB2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCA*UAAAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GB2|1|BA|C|2
6GB2|1|BA|C|3
6GB2|1|BA|A|4
*
6GB2|1|BA|U|147
6GB2|1|BA|A|148
6GB2|1|BA|A|149
6GB2|1|BA|A|150
6GB2|1|BA|A|151
6GB2|1|BA|G|152

Current chains

Chain BA

16S ribosomal RNA, mitochondrial

Nearby chains

Chain B5

Mitochondrial ribosomal protein L32

Chain BU

Mitochondrial ribosomal protein L20

Chain BW

Mitochondrial ribosomal protein L22

Chain Bh

Mitochondrial ribosomal protein L44

Chain Bn

Mitochondrial ribosomal protein L51