IL_6GB2_026

3D structure

PDB id

6GB2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACCA*UAAUUACAU

Length

13 nucleotides

Bulged bases

6GB2|1|BA|A|745, 6GB2|1|BA|U|746, 6GB2|1|BA|U|747

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GB2|1|BA|A|710
6GB2|1|BA|C|711
6GB2|1|BA|C|712
6GB2|1|BA|A|713
*
6GB2|1|BA|U|743
6GB2|1|BA|A|744
6GB2|1|BA|A|745
6GB2|1|BA|U|746
6GB2|1|BA|U|747
6GB2|1|BA|A|748
6GB2|1|BA|C|749
6GB2|1|BA|A|750
6GB2|1|BA|U|751

Current chains

Chain BA

16S ribosomal RNA, mitochondrial

Nearby chains

Chain BX

Mitochondrial ribosomal protein L23

Chain Ba

Mitochondrial ribosomal protein L37

Chain Be

Mitochondrial ribosomal protein L41

Chain Bw

mL65, MRPS30