IL_6GC0_105

3D structure

PDB id

6GC0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

6GC0|1|A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC0|1|A|C|1043
6GC0|1|A|C|1044
6GC0|1|A|C|1045
6GC0|1|A|A|1046
6GC0|1|A|G|1047
6GC0|1|A|A|1048
6GC0|1|A|C|1049
6GC0|1|A|A|1050
6GC0|1|A|G|1051
6GC0|1|A|C|1052
*
6GC0|1|A|G|1107
6GC0|1|A|U|1108
6GC0|1|A|C|1109
6GC0|1|A|G|1110
6GC0|1|A|A|1111
6GC0|1|A|G|1112

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain G

50S ribosomal protein L6