IL_6GC0_107

3D structure

PDB id

6GC0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGUAGGCUG*CAAGGCUGAGG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC0|1|A|U|1474
6GC0|1|A|G|1475
6GC0|1|A|U|1476
6GC0|1|A|A|1477
6GC0|1|A|G|1478
6GC0|1|A|G|1479
6GC0|1|A|C|1480
6GC0|1|A|U|1481
6GC0|1|A|G|1482
*
6GC0|1|A|C|1507
6GC0|1|A|A|1508
6GC0|1|A|A|1509
6GC0|1|A|G|1510
6GC0|1|A|G|1511
6GC0|1|A|C|1512
6GC0|1|A|U|1513
6GC0|1|A|G|1514
6GC0|1|A|A|1515
6GC0|1|A|G|1516
6GC0|1|A|G|1517

Current chains

Chain A

23S ribosomal RNA

Nearby chains