IL_6GC0_109

3D structure

PDB id

6GC0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCGUAAC*GGAGAAGG

Length

15 nucleotides

Bulged bases

6GC0|1|A|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC0|1|A|C|1685
6GC0|1|A|C|1686
6GC0|1|A|G|1687
6GC0|1|A|U|1688
6GC0|1|A|A|1689
6GC0|1|A|A|1690
6GC0|1|A|C|1691
*
6GC0|1|A|G|1696
6GC0|1|A|G|1697
6GC0|1|A|A|1698
6GC0|1|A|G|1699
6GC0|1|A|A|1700
6GC0|1|A|A|1701
6GC0|1|A|G|1702
6GC0|1|A|G|1703

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2