IL_6GC0_123

3D structure

PDB id

6GC0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGGUAGA*UGCGAAUAC

Length

17 nucleotides

Bulged bases

6GC0|1|A|G|914

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC0|1|A|G|856
6GC0|1|A|G|857
6GC0|1|A|G|858
6GC0|1|A|G|859
6GC0|1|A|U|860
6GC0|1|A|A|861
6GC0|1|A|G|862
6GC0|1|A|A|863
*
6GC0|1|A|U|913
6GC0|1|A|G|914
6GC0|1|A|C|915
6GC0|1|A|G|916
6GC0|1|A|A|917
6GC0|1|A|A|918
6GC0|1|A|U|919
6GC0|1|A|A|920
6GC0|1|A|C|921

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain W

50S ribosomal protein L27

Chain Z

50S ribosomal protein L30