IL_6GC7_085
3D structure
- PDB id
- 6GC7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- UUAG*CAAAAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GC7_085 not in the Motif Atlas
- Homologous match to IL_7A0S_008
- Geometric discrepancy: 0.5703
- The information below is about IL_7A0S_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15067.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6GC7|1|A|U|292
6GC7|1|A|U|293
6GC7|1|A|A|294
6GC7|1|A|G|295
*
6GC7|1|A|C|343
6GC7|1|A|A|344
6GC7|1|A|A|345
6GC7|1|A|A|346
6GC7|1|A|A|347
6GC7|1|A|A|348
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain U
- 50S ribosomal protein L24
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