IL_6GC8_031

3D structure

PDB id

6GC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate - 50S rec*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

6GC8|1|A|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6GC8_031 not in the Motif Atlas

Homologous match to IL_5J7L_275

Geometric discrepancy: 0.341

The information below is about IL_5J7L_275

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29366.1

Basepair signature

cWW-cWW

Number of instances in this motif group

266

Unit IDs

6GC8|1|A|G|880
6GC8|1|A|G|881
*
6GC8|1|A|U|895
6GC8|1|A|A|896
6GC8|1|A|C|897

Current chains

Chain A

23S ribosomal RNA

Nearby chains