IL_6GQB_179

3D structure

PDB id

6GQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCCGGUC*GGAUUUC

Length

14 nucleotides

Bulged bases

6GQB|1|2|U|657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GQB|1|2|G|652
6GQB|1|2|C|653
6GQB|1|2|C|654
6GQB|1|2|G|655
6GQB|1|2|G|656
6GQB|1|2|U|657
6GQB|1|2|C|658
*
6GQB|1|2|G|676
6GQB|1|2|G|677
6GQB|1|2|A|678
6GQB|1|2|U|679
6GQB|1|2|U|680
6GQB|1|2|U|681
6GQB|1|2|C|682

Current chains

Chain 2

18S ribosomal RNA

Nearby chains