IL_6GQB_250
3D structure
- PDB id
- 6GQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAUAGAG*CUUUAUAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GQB|1|1|C|2444
6GQB|1|1|A|2445
6GQB|1|1|U|2446
6GQB|1|1|A|2447
6GQB|1|1|G|2448
6GQB|1|1|A|2449
6GQB|1|1|G|2450
*
6GQB|1|1|C|2496
6GQB|1|1|U|2497
6GQB|1|1|U|2498
6GQB|1|1|U|2499
6GQB|1|1|A|2500
6GQB|1|1|U|2501
6GQB|1|1|A|2502
6GQB|1|1|G|2503
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain BA
- 60S ribosomal protein L1-A
- Chain i
- 60S ribosomal protein L36-A
- Chain r
- 40S ribosomal protein S1-A
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