IL_6GSJ_197
3D structure
- PDB id
- 6GSJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.96 Å
Loop
- Sequence
- UGAAAGAC*GGGGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GSJ_197 not in the Motif Atlas
- Homologous match to IL_4LFB_026
- Geometric discrepancy: 0.2815
- The information below is about IL_4LFB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04211.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6GSJ|1|1G|U|605
6GSJ|1|1G|G|606
6GSJ|1|1G|A|607
6GSJ|1|1G|A|608
6GSJ|1|1G|A|609
6GSJ|1|1G|G|610
6GSJ|1|1G|A|611
6GSJ|1|1G|C|612
*
6GSJ|1|1G|G|628
6GSJ|1|1G|G|629
6GSJ|1|1G|G|630
6GSJ|1|1G|G|631
6GSJ|1|1G|A|632
6GSJ|1|1G|G|633
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 32
- 30S ribosomal protein S4
- Chain 72
- 30S ribosomal protein S8
- Chain 7A
- 30S ribosomal protein S16
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