IL_6GSK_110
3D structure
- PDB id
- 6GSK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.36 Å
Loop
- Sequence
- GAGC*GCC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GSK_110 not in the Motif Atlas
- Geometric match to IL_4P3T_002
- Geometric discrepancy: 0.3568
- The information below is about IL_4P3T_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01472.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6GSK|1|14|G|1448
6GSK|1|14|A|1449
6GSK|1|14|G|1449|||A
6GSK|1|14|C|1450
*
6GSK|1|14|G|1461
6GSK|1|14|C|1462
6GSK|1|14|C|1463
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 55
- 50S ribosomal protein L17
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