IL_6GSK_211
3D structure
- PDB id
- 6GSK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.36 Å
Loop
- Sequence
- GUUGC*GCACUC
- Length
- 11 nucleotides
- Bulged bases
- 6GSK|1|1G|U|1125, 6GSK|1|1G|U|1126
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GSK_211 not in the Motif Atlas
- Homologous match to IL_5J7L_051
- Geometric discrepancy: 0.5818
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6GSK|1|1G|G|1124
6GSK|1|1G|U|1125
6GSK|1|1G|U|1126
6GSK|1|1G|G|1127
6GSK|1|1G|C|1128
*
6GSK|1|1G|G|1144
6GSK|1|1G|C|1145
6GSK|1|1G|A|1146
6GSK|1|1G|C|1147
6GSK|1|1G|U|1148
6GSK|1|1G|C|1149
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 1A
- 30S ribosomal protein S10
- Chain 82
- 30S ribosomal protein S9
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