IL_6GSL_010
3D structure
- PDB id
- 6GSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- GACCC*GUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GSL_010 not in the Motif Atlas
- Geometric match to IL_4PHY_006
- Geometric discrepancy: 0.3929
- The information below is about IL_4PHY_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68909.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
6GSL|1|13|G|184
6GSL|1|13|A|185
6GSL|1|13|C|186
6GSL|1|13|C|186|||A
6GSL|1|13|C|186|||B
*
6GSL|1|13|G|191|||E
6GSL|1|13|U|191|||F
6GSL|1|13|U|192
6GSL|1|13|C|193
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain BI
- 30S ribosomal protein S20
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