IL_6GSL_042
3D structure
- PDB id
- 6GSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- GG*UCAGC
- Length
- 7 nucleotides
- Bulged bases
- 6GSL|1|13|C|1200, 6GSL|1|13|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GSL_042 not in the Motif Atlas
- Homologous match to IL_5J7L_048
- Geometric discrepancy: 0.1016
- The information below is about IL_5J7L_048
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
6GSL|1|13|G|1057
6GSL|1|13|G|1058
*
6GSL|1|13|U|1199
6GSL|1|13|C|1200
6GSL|1|13|A|1201
6GSL|1|13|G|1202
6GSL|1|13|C|1203
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 1I
- 30S ribosomal protein S10
- Chain 1K
- Transfer RNA; tRNA
- Chain 2E
- 30S ribosomal protein S3
- Chain 5I
- 30S ribosomal protein S14 type Z
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