IL_6GSN_074
3D structure
- PDB id
- 6GSN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a partial yeast 48S preinitiation complex in closed conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.75 Å
Loop
- Sequence
- CUA*UGGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GSN_074 not in the Motif Atlas
- Homologous match to IL_8C3A_465
- Geometric discrepancy: 0.2528
- The information below is about IL_8C3A_465
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76236.1
- Basepair signature
- cWW-tWH-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6GSN|1|2|C|1387
6GSN|1|2|U|1388
6GSN|1|2|A|1389
*
6GSN|1|2|U|1405
6GSN|1|2|G|1406
6GSN|1|2|G|1407
6GSN|1|2|A|1408
6GSN|1|2|A|1409
6GSN|1|2|G|1410
Current chains
- Chain 2
- 18S rRNA (1798-MER)
Nearby chains
- Chain F
- KLLA0D10659p
- Chain Q
- 40S ribosomal protein S16
- Chain R
- KLLA0B01474p
- Chain g
- KLLA0E12277p
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