IL_6GXM_082

3D structure

PDB id

6GXM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUGUGUAGGAUAGG*CCCUU

Length

19 nucleotides

Bulged bases

6GXM|1|A|U|2111, 6GXM|1|A|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GXM|1|A|A|2108
6GXM|1|A|U|2109
6GXM|1|A|G|2110
6GXM|1|A|U|2111
6GXM|1|A|G|2112
6GXM|1|A|U|2113
6GXM|1|A|A|2114
6GXM|1|A|G|2115
6GXM|1|A|G|2116
6GXM|1|A|A|2117
6GXM|1|A|U|2118
6GXM|1|A|A|2119
6GXM|1|A|G|2120
6GXM|1|A|G|2121
*
6GXM|1|A|C|2177
6GXM|1|A|C|2178
6GXM|1|A|C|2179
6GXM|1|A|U|2180
6GXM|1|A|U|2181

Current chains

Chain A

23S ribosomal RNA

Nearby chains