Loop IL_6GXM

3D structure

PDB id: 6GXM (explore in PDB, NAKB, or RNA 3D Hub)
Description: Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

Loop

Sequence: GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAA*UCAC
Length: 40 nucleotides
Bulged bases: 6GXM|1|A|U|1061, 6GXM|1|A|C|1064, 6GXM|1|A|U|1065, 6GXM|1|A|U|1066, 6GXM|1|A|A|1070, 6GXM|1|A|U|1078
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6GXM|1|A|G|1055
6GXM|1|A|G|1056
6GXM|1|A|A|1057
6GXM|1|A|U|1058
6GXM|1|A|G|1059
6GXM|1|A|U|1060
6GXM|1|A|U|1061
6GXM|1|A|G|1062
6GXM|1|A|G|1063
6GXM|1|A|C|1064
6GXM|1|A|U|1065
6GXM|1|A|U|1066
6GXM|1|A|A|1067
6GXM|1|A|G|1068
6GXM|1|A|A|1069
6GXM|1|A|A|1070
6GXM|1|A|G|1071
6GXM|1|A|C|1072
6GXM|1|A|A|1073
6GXM|1|A|G|1074
6GXM|1|A|C|1075
6GXM|1|A|C|1076
6GXM|1|A|A|1077
6GXM|1|A|U|1078
6GXM|1|A|C|1079
6GXM|1|A|A|1080
6GXM|1|A|U|1081
6GXM|1|A|U|1082
6GXM|1|A|U|1083
6GXM|1|A|A|1084
6GXM|1|A|A|1085
6GXM|1|A|A|1086
6GXM|1|A|G|1087
6GXM|1|A|A|1088
6GXM|1|A|A|1089
6GXM|1|A|A|1090
*
6GXM|1|A|U|1101
6GXM|1|A|C|1102
6GXM|1|A|A|1103
6GXM|1|A|C|1104

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain 4: 50S ribosomal protein L36
Chain 5: 50S ribosomal protein L10
Chain I: 50S ribosomal protein L11
Chain M: 50S ribosomal protein L16

IL_6GXM_186