IL_6GXN_002
3D structure
- PDB id
- 6GXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GC*GAC
- Length
- 5 nucleotides
- Bulged bases
- 6GXN|1|A|A|443
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GXN_002 not in the Motif Atlas
- Homologous match to IL_5J7L_246
- Geometric discrepancy: 0.1604
- The information below is about IL_5J7L_246
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
6GXN|1|A|G|36
6GXN|1|A|C|37
*
6GXN|1|A|G|442
6GXN|1|A|A|443
6GXN|1|A|C|444
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain Q
- 50S ribosomal protein L20
Coloring options: